Archive for May, 2008

Moved my desktop to Hardy today. Had a few errors but it all went smoothy, right up to the point that I tried to use it, when I was getting lots of wierd stuff with the mouse. Basically, left click was giving double click events.

Took about an hour to work out; I’d configured xorg.conf a while back to enable mouse wheel emulation on my trackball. As a result, the upgrade didn’t add the vital new line (Option: Core Pointer) without which it doesn’t work.

X still sucks; the configuration is bizarre, unfriendly, inconsistent and impossible to debug. One day this will all get fixed. I hope it’s soon.

Actually, thinking about it, the install balked have way through and asked me something, which was irritating as I was at lunch; unintended installs are good!

Originally published on my old blog site.

Saw the Doll’s house at the Northern Stage this week; it was well done, had some nice gags in it. But basically, it was dreary, long-winded and rather dull. I didn’t like any of the characters, the central plot device was silly and I just wanted it to end. Right at the end, it perked up a bit, with the patronized woman, spreading her wings and starting anew; but, this felt unbelievable, and it makes no sense spending two and a half setting the scene for 5 minutes of excitement. I can see that the play must have been revolutionary at the time, but it now is only of historical interest.

Battle of the Planets, on the other hand, has little plot, doesn’t really make sense, and is generally daft. But it’s full of 70′s haircuts, the animation is exciting and the score is wonderful. Added to this a chief baddie who wears red, thigh-length boots, a villanous cackle and the most fullsome pout this side of page 3 and you have a winner. The Doll’s House has probably helped to change our world, redefine the relationship between men and women, and has last a 100 years. But BofP was more fun to watch and at 30 years old ain’t doing bad either.

Originally published on my old blog site.

Today is the kick-off meeting for ONDEX. This is a new project which is doing something that I’ve wanted to do for ages; in a nutshell, it’s a large, graph-based datawarehouse. It’s rather similar to a proposal that I wrote with Mark Wilkinson from BioMOBY a few years back, with one important difference — the system actually exists, produced at Rothamstead over the last few years.

The new project involves integrating some other bits of technology — taverna, text mining and so on, and a couple of specific biological examples. I think it’s going to be a pretty cool project, and we should get some useful biology out of it.

Two things that I have learnt today: firstly, what "Ondex" actually stands for is not actually sure and, secondly, some varieties of willow are dodecaploid. Why would any plant need that many genomes?

Originally published on my old blog site.

I had to take my car to KwikFit yesterday as my exhaut was hanging off by a thread; I was irritated to be phoned up by them the same day. How was the service, they asked? Could we have done anything better? Well, the exhaust hasn’t falled off in the half mile from the garage to my house, and can you reduce the cost to 20 quid, please. Free would be better. Turns out they didn’t care, they just wanted to try and flog me car insurance. No, you can’t give me a quote, and no you can’t call me back next year.

I’ve been reading "Medicine balls" by Phil Hammond; fine stuff. He repeats the old ear, nose and throat gag: never put anything in your ear small than your elbow. This makes me wonder, how to explain the stethoscope?

I’ve also added a new Silly idea. Only 6 months since the last; what a flood of ideas I am having?

Originally published on my old blog site.