An Exercise in Irrelevance

I’ve been an avid user of fusesmb for a while. I found it to be very good, but a little hard to set up. For no readily apparent reason, it has stopped working for me.

So, now I am trying out sshfs instead. This worked better than fusesmb anyway — in particular directory listing was much quicker which was a real problem with fusesmb. However, I had a major problem which was that rsync did not work to a sshfs mounted directory. I got a wierd error about file renaming. This was a hassle — I use rsync quite a lot. In particular the —delete option is great for websites which I develop in one place, and publish to another.

Anyway, I found the solution today. Delightfully, it is this. Instead of mounting with sshfs, you add a new option to get sshfs -o workaround=rename. It’s rare that you see such a honest command line…

Originally published on my old blog site.

I’ve been looking through the stats created by workrave. I’m slightly surprised to find that I make between 16 and 45,000 keystrokes per day (on my desktop at work — more if I include home). And around half a kilometre of mouse movement.

That’s a lot.

Originally published on my old blog site.

I’d been saddended earlier by the closure of my local hippie-veggie shop, "OutOfThisWorld".

I was rather surprised therefore to walk into one in Beeston, Nottigham at the weekend. It turns out that the both this branch and the one in Leeds were bought by their managers from the parent company.

Good stuff! Hope that they do well. With any luck, they might expand. Newcastke might be a good place to go, as they are in need of a new hippie-veggie shop I hear.

Originally published on my old blog site.

I was most entertained my Lord Falconers technically illiterate idea: that online news resources should remove prejudicial information about individuals during trials.

Pretty stupid idea. Apart from the technically difficult task of working out when a web page is about a particular individual, it seems to ignore the reality of the internet — that’s is a global resource and British law does not affect it all. Asides from aggregator and archiving sites like http://www.archive.org, which would have to remove, and then reinstate potentially thousands of websites per day.

Suggesting that we pass new rules, attempting to put the genie back in the bottle, lacks any sense at all. Perhaps not a surprise from a judge.

Originally published on my old blog site.

I’ve been getting some needling recently for my grammar, spelling and composition, at least on these pages. There is clearly some justification for it. I normally have a relatively high standard for these things and, yet, these blog pages do fall below these standards.

Ultimately, the means of communication do affect how we behave; the blog feels more conversational, less formal. I tend to write this stuff out once, and rarely even proof-read it.

I shall think on this; my worry is that if I spend time improving the presentation, I might just not write anything at all. But then, if a jobs worth doing…

Originally published on my old blog site.

There was much amusement in the CARMEN project today. The journal Neuroinformatics published what looked like an interesting article on data sharing.

Sadly, however, no one has been able to read it; it’s a Springer article and none of us can read it because it’s closed access and $32 to look at. A strange and ironic reflection on the state of data sharing.

Perhaps, is what the paper says. Data is Mine!

Addendum

Immediately after posting this, I started writing some lecture notes. I have so far copied images of Northerns, Westerns and several kinds of immunofluorescence straight of the web, all legal, all thanks to the wonders of PLoS. It’s even easy to attribute them because they have given all of the figures individual DOIs. Working in neuroinformatics is interesting and exciting, but it also helps to remind me how wonderful bioinformatics it is.

Originally published on my old blog site.